wiki.davidhaberthuer.ch

aboutme

Anonymous (anonymous@undisclosed.example.com) — 2020-06-10T19:38:43+00:00

vita * born in 1976 in switzerland * lived in italy for my first 6 years * grew up in münsingen and bern * school education in switzerland, from primary to secondary to high-school * high-school education at the gymnasium köniz, nowadays köniz-lerbermatt, matura with socalled mathematical emphasis

abstracts

Anonymous (anonymous@undisclosed.example.com) — 2026-01-09T14:25:27+00:00

Submitted abstracts for conferences and meetings. *My* submitted abstracts are archived here or reside on this page until they have been either shown as a poster or I have given the talk. Abstracts where I've been part of the team or have not been presented in the end remain listed here for book-keeping reasons.

acinarsize

Anonymous (anonymous@undisclosed.example.com) — 2020-06-10T19:38:44+00:00

Dies ist/wird eine Anleitung für Eveline, wie die Alveolen in den Acini zu zählen sind. Alveolen zählen Die Alveolen werden mit dem STEPanizer gezählt. Um die Alveolen zu zählen, muss die Beta-Version mit aktiviertem Disector verwendet werden (unterer “Startµ $\text{Number of Alveoli} = \frac{\Sigma\tex… </article> <article> <h1>bibtex</h1> <p>Anonymous (anonymous@undisclosed.example.com) — 2020-06-10T19:38:44+00:00</p> This is the namespace for all the BibTeX-files of my publications. Please look up the publication you're looking under the according entry on the publication page. </article> <article> <h1>bio</h1> <p>Anonymous (anonymous@undisclosed.example.com) — 2020-10-27T15:46:45+00:00</p> David Haberthür studied physics, and obtained his PhD in 2010. He worked as a PostDoc at both the Institute of Anatomy of the University of Bern and the TOMCAT beamline of the Swiss Light Source at the Paul Scherrer Institute in Villigen, Switzerland. Currently, he is again working as a PostDoc at the Institute of Anatomy of the University of Bern in Switzerland in the microCT group of the 'Topographic and clinical Anatomy' division. He works mainly in Python to gather objective meaningful numb… </article> <article> <h1>code.ana.unibe.ch</h1> <p>Anonymous (anonymous@undisclosed.example.com) — 2020-06-10T19:38:43+00:00</p> Subversion-Server <http://code.ana.unibe.ch> ist mein SVN-server, der auf der virtuellen Server-Infrastruktur der Uni Bern läuft. Der Server läuft mit jeOS, einem Ubuntu-Derivat und hat nebst subversion auch WebSVN installiert, so dass der Code auch per Web angeschaut werden kann. Der Server wurde mit Hilfe des </article> <article> <h1>code</h1> <p>Anonymous (anonymous@undisclosed.example.com) — 2020-06-10T19:38:43+00:00</p> Code Snippets LaTeX * my document preamble * some other notes on latex are collected here MATLAB * my m-file skeleton * other matlab snippets Image Processing * ImageMagick * ImageJ * MeVisLab </article> <article> <h1>conferences</h1> <p>Anonymous (anonymous@undisclosed.example.com) — 2020-06-10T19:38:43+00:00</p> These are notes I made at conferences, sometimes from sessions, sometimes just stuff I need or want to look up lateron. * XRM2008 * ATS2009 * SSOM09 * USGEB11 </article> <article> <h1>contact</h1> <p>Anonymous (anonymous@undisclosed.example.com) — 2020-06-10T19:38:43+00:00</p> Contact Information <div id=$ David Haberthür

Institute of Anatomy, University of Bern

haberthuer@ana.unibe.ch

Ba…

cv

Anonymous (anonymous@undisclosed.example.com) — 2020-06-10T19:38:43+00:00

Curriculum Vitae Please preview my CV below or download it as a [pdf] (235 kB).

grants

Anonymous (anonymous@undisclosed.example.com) — 2020-10-15T08:04:19+00:00

Angiography in cadaver limbs of horses * Elke Van der Vekens, Silke Grabherr, Sabine Kässmeyer, David Haberthür, Ruslan Hlushchuk * 1 year, starting from 21.02.2021

index

Anonymous (anonymous@undisclosed.example.com) — 2020-06-10T19:38:43+00:00

David Haberthür This is my :wikified homepage at the Institute of Anatomy at the University of Bern. For the moment the wiki can only be edited by me, if you'd like to add to it, contact me. On this site you can find information about me and also my curriculum vitae if you'd like. I enjoy showing my work at conferences and meetings. For this I submit

ips_and_adresses

Anonymous (anonymous@undisclosed.example.com) — 2020-06-10T19:38:43+00:00

Noteworthy IPs and Adresses ANA * Laufwerke * P: 130.92.22.22/users/haberthuer/P/doc * U: 190.92.22.10/U/Gruppe_Schittny * U: 190.92.22.10/_EinzelUser/Haberthuer_David * W: anatom/webusers/haberthuer * TeraStations * TeraStation T (anatera2): 130.92.22.182

journals

Anonymous (anonymous@undisclosed.example.com) — 2020-06-10T19:38:44+00:00

Journals to look into for publishing “stuff” (e.g. the “wide field scan paper”) * X-Ray Optics and Instrumentation * Impact Factor: * X-Ray Optics and Instrumentation aims to promote research and technology development in x-ray optics, sources, detectors, and systems. Papers are encouraged in the development and analysis of individual components as well as system design and the interaction of component properties in system performance. X-Ray Optics and Instrumentation is an open access…

latex

Anonymous (anonymous@undisclosed.example.com) — 2020-06-10T19:38:44+00:00

LaTeX - my standard-preamble - my minimal document Subversion information \usepackage{svn-multi} add \svnidlong {$HeadURL$} {$LastChangedDate$} {$LastChangedRevision$} {$LastChangedBy$} in document. set the subversion property svn:keywords of them to HeadURL LastChangedDate LastChangedRevision LastChangedBy

manuals

Anonymous (anonymous@undisclosed.example.com) — 2020-06-10T19:38:43+00:00

These are some manuals I've written at the start of my PhD. Most of the stuff has now been ported to its own page on this wiki, so this is mostly here just for archival reasons. PSI My Stuff * WideFieldScanning-Documentation -> probably best to go

masterarbeit

Anonymous (anonymous@undisclosed.example.com) — 2020-06-10T19:38:43+00:00

2do (Stuff to ask Marco, Fede, Chris) ProgressReport c++-notizen allgemeine Notizen zu Programmierkniffs oder sonst. Ueberlegungen Pathway zur vollständigen Rekonstruktion results

matlab

Anonymous (anonymous@undisclosed.example.com) — 2020-06-10T19:38:43+00:00

MATLAB-Stuff * my rudimentary file skeleton Code and other snippets Write a multipage TIFF for i=1:100 a(:,:,i)=rand(256); imwrite(a(:,:,i),'file.tif', 'writemode', 'append') end size(a) Adapted from this MATLAB support question. Generates a random 256×256 pixel large image, saves it in the i

mevislab

Anonymous (anonymous@undisclosed.example.com) — 2020-06-10T19:38:43+00:00

- IsosurfaceVisualisierung mit ROI

microct

Anonymous (anonymous@undisclosed.example.com) — 2020-06-10T19:38:44+00:00

SCANCO MicroCT µCT 40 In this namespace you'll find instructions on how to access and use the Scanco µCT 40 at the Department of Clinical Research. Generally, SCANCO has an extensive FAQ on their site. You can access the FAQ for Customers as the User “users@scanco.ch”. David or Sebastien know the password for this login.

posters

Anonymous (anonymous@undisclosed.example.com) — 2025-08-15T08:49:33+00:00

Usually, the first author is the presenting one. If not, s/he is marked in bold. (Searching for Micron- to Sub-micron-sized) Glassy Inclusions in Martian Meteorites * P-E. M. C. Martin, I. Leya, A. Pommerol, H. Bus…

psi

Anonymous (anonymous@undisclosed.example.com) — 2020-06-10T19:38:43+00:00

check the name-space-list in the sidebar for all documents.

publications

Anonymous (anonymous@undisclosed.example.com) — 2025-12-08T14:02:40+00:00

Below is a list of my publications. If you'd like to see a citation report, please have a look at these reports from Web of Science, Scopus, Google Scholar or orcid. Submitted OR In revision Contrast-enhanced microCT method for assessing peri-implant soft tissue vascularization * Oleksiy-Zakhar Khoma, Benjamin Bellon, Rebecca Sandgren, Benjamin E. Pippenger, David Haberthür, Ruslan Hlushch…

remote_access_anatomie

Anonymous (anonymous@undisclosed.example.com) — 2020-06-10T19:38:43+00:00

Remote access to ana.unibe.ch drives * Log in to the web VPN of the University of Bern * In the top right window, enter * <\\nas.ana.unibe.ch\ANA\users\$USERNAME$\P\> to access your home directory * <\\nas.ana.unibe.ch\ANA\u\> to access the U: drive * <\\130.92.22.49\share> or \\anatera4 to access the 8TB TeraStation * <\\nas.ana.unibe.ch\ana\schittny\> to access the group tape archive * <\\anadata\Gr_Schittny\> to access the old AnaData

reviews

Anonymous (anonymous@undisclosed.example.com) — 2020-11-12T12:26:54+00:00

Manuscripts I reviewed Three-Dimensional Separation and Characterization of Fractures in X-Ray Computed Tomographic Images of Rocks * Francesco Cappuccio, Virginia G. Toy, Steven Mills and Ludmila Adam * doi:10.3389/feart.2020.529263